ttype patient gene classification type chr pos ref_allele newbase context65 cons46 BRCA BR-0036 BRCA1 SNP Nonsense_Mutation 17 41246468 G T 34 68 BRCA BR-MEX-027 BRCA1 SNP Missense_Mutation 17 41245272 T A 63 58 CLL CLL-JP BRCA1 SNP Missense_Mutation 17 41245665 C T 20 44 DLBCL DLBCL-Ls2590 BRCA1 SNP Missense_Mutation 17 41246052 G C 48 55 ESO ESO-075 BRCA1 SNP Missense_Mutation 17 41243877 G A 43 69 HNSC HN_62699 BRCA1 SNP Missense 17 41245887 T C 54 54 HNSC HN_62739 BRCA1 SNP Missense 17 41222985 C T 32 51 HNSC HN_62739 BRCA1 SNP Missense 17 41245669 C T 20 66 LUAD LUAD-B01024 BRCA1 SNP Missense_Mutation 17 41256957 T A 57 57 LUAD LUAD-F00162 BRCA1 SNP Missense_Mutation 17 41245978 C T 26 49 LUAD LUAD-NYU284 BRCA1 SNP Silent 17 41223011 T G 55 47 LUAD LUAD-NYU545 BRCA1 SNP Silent 17 41251883 G A 45 48 LUAD LUAD-S01315 BRCA1 SNP Missense_Mutation 17 41222985 C A 32 51 LUAD LUAD-S01315 BRCA1 SNP Silent 17 41244965 G A 45 61 LUAD LUAD-S01331 BRCA1 SNP Silent 17 41246426 T C 59 52 MEL ME009 BRCA1 SNP Silent 17 41245108 G A 36 51 MEL ME020 BRCA1 SNP Silent 17 41245901 A T 15 54 MEL ME049 BRCA1 SNP Silent 17 41244869 C T 32 49 MEL MEL-13537 BRCA1 SNP Missense_Mutation 17 41226504 T C 53 56 MEL MEL-JWCI-14 BRCA1 SNP Nonsense_Mutation 17 41243941 G A 39 69 MEL MEL-JWCI-14 BRCA1 SNP Missense_Mutation 17 41244613 G A 37 51 MEL MEL-JWCI-WGS-25 BRCA1 SNP Missense_Mutation 17 41243572 G A 46 48 MM MM-0344 BRCA1 SNP Missense 17 41256914 C A 17 52 MM MM-0493 BRCA1 SNP Missense_Mutation 17 41245321 T C 61 54 MM MM-0629 BRCA1 SNP Silent 17 41244166 G A 33 59 OV TCGA-04-1357 BRCA1 SNP Nonsense_Mutation 17 41226411 G A 48 55 LUAD TCGA-05-4382 BRCA1 SNP Missense_Mutation 17 41246314 C A 17 56 LUAD TCGA-05-4396 BRCA1 SNP Missense_Mutation 17 41215947 C A 23 78 LUAD TCGA-05-4424 BRCA1 SNP Missense_Mutation 17 41243499 C G 26 50 LUAD TCGA-05-5420 BRCA1 SNP Silent 17 41245544 G A 45 51 GBM TCGA-06-0649 BRCA1 SNP Missense_Mutation 17 41244603 G A 47 60 GBM TCGA-06-5858 BRCA1 SNP Missense_Mutation 17 41243940 C T 31 43 OV TCGA-13-0730 BRCA1 SNP Nonsense_Mutation 17 41197784 G A 39 53 OV TCGA-13-0761 BRCA1 DEL Splice_Site 17 41228504 C - 18 74 OV TCGA-13-0804 BRCA1 SNP Missense_Mutation 17 41258544 G C 46 56 OV TCGA-13-1489 BRCA1 INS Frame_Shift_Ins 17 41243753 - TT 16 55 LUAD TCGA-17-Z026 BRCA1 SNP Missense_Mutation 17 41199690 C G 32 63 LUAD TCGA-17-Z042 BRCA1 SNP Nonsense_Mutation 17 41244214 C A 32 53 LUSC TCGA-18-3409 BRCA1 SNP Missense_Mutation 17 41245974 A G 2 53 LUSC TCGA-18-3421 BRCA1 SNP Nonsense_Mutation 17 41256906 G A 45 68 LUSC TCGA-18-5592 BRCA1 SNP Silent 17 41246321 T A 53 47 LUSC TCGA-21-5782 BRCA1 SNP Missense_Mutation 17 41246589 C G 32 69 LUSC TCGA-22-4613 BRCA1 SNP Missense_Mutation 17 41219706 C A 19 59 OV TCGA-23-1026 BRCA1 DEL Frame_Shift_Del 17 41245110 C - 30 55 OV TCGA-24-2035 BRCA1 DEL Frame_Shift_Del 17 41215914 C - 30 78 OV TCGA-25-1625 BRCA1 SNP Nonsense_Mutation 17 41256234 C A 29 80 OV TCGA-25-1630 BRCA1 DEL Frame_Shift_Del 17 41245991 C - 32 61 OV TCGA-25-1632 BRCA1 INS Frame_Shift_Ins 17 41243899 - TAAGTTCT 12 54 OV TCGA-29-2427 BRCA1 SNP Nonsense_Mutation 17 41246256 A C 13 54 LUSC TCGA-34-2600 BRCA1 SNP Missense_Mutation 17 41243518 C T 29 57 LUSC TCGA-34-2600 BRCA1 SNP Missense_Mutation 17 41244205 C G 32 58 LUSC TCGA-34-2600 BRCA1 SNP Missense_Mutation 17 41244844 C G 29 51 LUSC TCGA-39-5028 BRCA1 SNP Missense_Mutation 17 41246585 C A 22 81 LUSC TCGA-39-5037 BRCA1 SNP Missense_Mutation 17 41245215 C T 26 49 GBM TCGA-41-2575 BRCA1 SNP Missense_Mutation 17 41245683 G A 38 53 LUSC TCGA-43-5668 BRCA1 SNP Splice_Site 17 41215391 C T 24 77 LUAD TCGA-44-3396 BRCA1 SNP Missense_Mutation 17 41244550 C G 32 54 LUSC TCGA-46-3769 BRCA1 SNP Nonsense_Mutation 17 41244070 T A 64 57 LUAD TCGA-50-6593 BRCA1 SNP Missense_Mutation 17 41251814 C A 32 46 LUSC TCGA-66-2756 BRCA1 SNP Missense_Mutation 17 41246004 T A 54 75 GBM TCGA-76-4927 BRCA1 SNP Missense_Mutation 17 41244612 C T 19 49 LUAD TCGA-80-5611 BRCA1 SNP Missense_Mutation 17 41245682 C T 27 41 LUAD TCGA-80-5611 BRCA1 SNP Missense_Mutation 17 41256153 C G 31 61 BRCA TCGA-A1-A0SH BRCA1 SNP Nonsense_Mutation 17 41244748 G A 45 56 BRCA TCGA-A1-A0SI BRCA1 SNP Missense_Mutation 17 41276089 C G 29 53 BRCA TCGA-A1-A0SK BRCA1 SNP Silent 17 41245985 T C 55 51 BRCA TCGA-A1-A0SO BRCA1 SNP Splice_Site 17 41276033 C T 18 69 BRCA TCGA-A7-A26H BRCA1 DEL Frame_Shift_Del 17 41245484 TGTC - 63 60 CRC TCGA-AA-3715 BRCA1 SNP Missense_Mutation 17 41246082 T C 54 63 CRC TCGA-AA-3977 BRCA1 SNP Silent 17 41215925 T C 62 50 CRC TCGA-AA-3977 BRCA1 SNP Missense_Mutation 17 41244829 C T 30 60 CRC TCGA-AA-3984 BRCA1 SNP Nonsense_Mutation 17 41226515 G T 45 56 CRC TCGA-AA-A00E BRCA1 SNP Missense_Mutation 17 41251830 C T 23 56 CRC TCGA-AA-A010 BRCA1 SNP Missense_Mutation 17 41245087 C A 32 48 CRC TCGA-AG-A002 BRCA1 SNP Missense_Mutation 17 41246189 C A 32 50 BRCA TCGA-AN-A0XU BRCA1 SNP Missense_Mutation 17 41201181 C A 18 76 BRCA TCGA-AO-A1KR BRCA1 DEL In_Frame_Del 17 41245615 AAC - 9 50 UCEC TCGA-AP-A051 BRCA1 SNP Missense_Mutation 17 41244009 C A 28 48 UCEC TCGA-AP-A051 BRCA1 SNP Missense_Mutation 17 41245828 G T 36 46 UCEC TCGA-AP-A051 BRCA1 SNP Missense_Mutation 17 41258540 G T 34 55 UCEC TCGA-AP-A056 BRCA1 SNP Missense_Mutation 17 41243774 C A 32 58 UCEC TCGA-AP-A056 BRCA1 SNP Missense_Mutation 17 41244562 T G 62 46 UCEC TCGA-AP-A0LM BRCA1 SNP Missense_Mutation 17 41245683 G A 38 53 BRCA TCGA-AR-A0U4 BRCA1 INS Frame_Shift_Ins 17 41244185 - T 16 49 UCEC TCGA-AX-A0J0 BRCA1 SNP Nonsense_Mutation 17 41245531 C A 32 80 KIRC TCGA-B0-4824 BRCA1 SNP Silent 17 41246254 G C 36 48 UCEC TCGA-B5-A0JY BRCA1 SNP Missense_Mutation 17 41246166 A C 1 63 UCEC TCGA-B5-A11E BRCA1 SNP Silent 17 41223140 G A 35 47 UCEC TCGA-B5-A11E BRCA1 SNP Nonsense_Mutation 17 41234451 G A 38 55 UCEC TCGA-B5-A11E BRCA1 SNP Missense_Mutation 17 41244723 G A 42 61 UCEC TCGA-B5-A11G BRCA1 SNP Missense_Mutation 17 41244451 C T 32 62 UCEC TCGA-B5-A11J BRCA1 SNP Silent 17 41246507 C T 17 35 UCEC TCGA-B5-A11N BRCA1 SNP Missense_Mutation 17 41245616 A C 2 57 BRCA TCGA-B6-A0X1 BRCA1 DEL Frame_Shift_Del 17 41276047 C - 32 69 HNSC TCGA-BA-6872 BRCA1 SNP Missense_Mutation 17 41244991 C T 29 81 BRCA TCGA-BH-A0DS BRCA1 SNP Missense_Mutation 17 41199695 T A 55 71 BRCA TCGA-BH-A0WA BRCA1 SNP Splice_Site 17 41223256 C T 32 74 KIRC TCGA-BP-4160 BRCA1 SNP Missense_Mutation 17 41267787 C A 29 54 KIRC TCGA-BP-4998 BRCA1 SNP Missense_Mutation 17 41197795 G A 35 64 UCEC TCGA-BS-A0TC BRCA1 SNP Missense_Mutation 17 41245921 C A 21 51 UCEC TCGA-BS-A0UF BRCA1 SNP Splice_Site 17 41201212 C A 32 77 UCEC TCGA-BS-A0UF BRCA1 SNP Silent 17 41226451 A T 11 56 UCEC TCGA-BS-A0UF BRCA1 SNP Missense_Mutation 17 41243927 C A 32 58 UCEC TCGA-BS-A0UJ BRCA1 SNP Missense_Mutation 17 41234570 T C 60 77 UCEC TCGA-BS-A0UV BRCA1 SNP Missense_Mutation 17 41234450 C T 31 46 BLCA TCGA-BT-A20W BRCA1 SNP Missense_Mutation 17 41244840 C G 17 57 BLCA TCGA-BT-A3PH BRCA1 SNP Missense_Mutation 17 41245834 C T 32 62 BRCA TCGA-C8-A12T BRCA1 SNP Missense_Mutation 17 41243518 C G 29 57 KIRC TCGA-CJ-4643 BRCA1 SNP Missense_Mutation 17 41234582 G C 44 70 HNSC TCGA-CN-5363 BRCA1 SNP Silent 17 41246660 T C 62 53 HNSC TCGA-CQ-5326 BRCA1 SNP Silent 17 41256889 C T 21 49 HNSC TCGA-CR-7404 BRCA1 SNP Missense_Mutation 17 41243826 G A 33 57 HNSC TCGA-CR-7404 BRCA1 SNP Missense_Mutation 17 41245102 G A 45 53 HNSC TCGA-CV-7097 BRCA1 SNP Missense_Mutation 17 41228515 C T 24 63 HNSC TCGA-CV-7099 BRCA1 SNP Missense_Mutation 17 41246860 C G 29 67 HNSC TCGA-CV-7245 BRCA1 SNP Missense_Mutation 17 41226510 C T 32 52 HNSC TCGA-CV-7248 BRCA1 SNP Missense_Mutation 17 41245558 T C 55 58 HNSC TCGA-CV-7250 BRCA1 SNP Missense_Mutation 17 41222997 C A 24 51 HNSC TCGA-CV-7424 BRCA1 SNP Silent 17 41276072 G A 45 54 KIRC TCGA-CZ-4853 BRCA1 SNP Missense_Mutation 17 41243622 T A 52 63 KIRC TCGA-CZ-4853 BRCA1 SNP Missense_Mutation 17 41243623 T G 64 74 UCEC TCGA-D1-A167 BRCA1 SNP Silent 17 41244935 C T 19 56 UCEC TCGA-D1-A17Q BRCA1 SNP Missense_Mutation 17 41244663 T G 62 69 UCEC TCGA-D1-A17Q BRCA1 SNP Silent 17 41245720 T G 53 75 UCEC TCGA-D1-A17Q BRCA1 SNP Missense_Mutation 17 41245866 G T 33 48 HNSC TCGA-D6-6823 BRCA1 SNP Splice_Site 17 41256883 A C 14 75 BLCA TCGA-DK-A1AE BRCA1 SNP Missense_Mutation 17 41246211 C G 32 59 BLCA TCGA-DK-A3IN BRCA1 SNP Silent 17 41246522 C G 29 55 BRCA TCGA-E2-A1L9 BRCA1 SNP Missense_Mutation 17 41244468 C A 28 67 BLCA TCGA-G2-A2EL BRCA1 SNP Nonsense_Mutation 17 41243707 G A 45 56